MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
2_2BalbC1BO2_S2
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 224
bases: 2,332,310 bps
CDS: 2,313
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,381
Total number of protein coding genes annotated/found:
2,313
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5054|JADGLU010000146.1
SEQF5054_01614
Genome Viewer
NA
AA
429/143
2916-3344
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01615
Genome Viewer
NA
AA
681/227
3405-4085
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01616
Genome Viewer
NA
AA
1101/367
4158-5258
Tyrosine recombinase XerC
SEQF5054|JADGLU010000146.1
SEQF5054_01617
Genome Viewer
NA
AA
1176/392
7464-6289
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01618
Genome Viewer
NA
AA
345/115
7814-7470
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01619
Genome Viewer
NA
AA
192/64
7992-7801
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01620
Genome Viewer
NA
AA
375/125
8373-7999
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01621
Genome Viewer
NA
AA
465/155
8876-8412
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01622
Genome Viewer
NA
AA
375/125
9250-8876
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01623
Genome Viewer
NA
AA
483/161
9725-9243
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01624
Genome Viewer
NA
AA
252/84
9984-9733
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01625
Genome Viewer
NA
AA
156/52
10142-9987
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01626
Genome Viewer
NA
AA
312/104
10455-10144
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01627
Genome Viewer
NA
AA
3504/1168
13958-10455
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01628
Genome Viewer
NA
AA
2046/682
15984-13939
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01629
Genome Viewer
NA
AA
867/289
16864-15998
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01630
Genome Viewer
NA
AA
3825/1275
20700-16876
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01631
Genome Viewer
NA
AA
300/100
21214-20915
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01632
Genome Viewer
NA
AA
1389/463
22705-21317
hypothetical protein
SEQF5054|JADGLU010000146.1
SEQF5054_01633
Genome Viewer
NA
AA
396/132
23294-22899
hypothetical protein
🡄
Items 21 - 40
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of 116 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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